Xylella fastidiosa metagenome in plants

Damien Griessinger 175 views
Dataset

Description

Oxford Nanopore Technologies device MinION platform was used to detect and identify Xylella fastidiosa subspecies and Sequence Type in plant material. The test was more sensitive than the real-time PCR tests currently recommended for the detection/identification of  Xylella fastidiosa. Accession number PRJNA575828.

License

no licence specified -

Funding

Italian Ministry MIPAAF, Project Oli.Di.X.I.It (“OLIvicoltura e Difesa da Xylella fastidiosa e da Insetti vettori in Italia”), D.M. 23773 del 6/09/2017

Source

https://doi.org/10.1101/810648

Organisms

  • Cistus monspeliensis
  • Lavandula
  • Olea europaea
  • Polygala myrtifolia
  • Prunus dulcis
  • Rhamnus alaternus
  • Salvia rosmarinus
  • Spartium junceum
  • Xylella fastidiosa
  • Xylella fastidiosa subsp. multiplex
  • Xylella fastidiosa subsp. pauca

Files

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