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Characterizing the Native Codon Usages of a Genome: An Axis Projection Approach
Codon usage can provide insights into the nature of the genes in a genome. Genes that are "native" to a genome (have not been recently acquired by horizontal transfer) range in codon usage from a l...
Genome rearrangement distances and gene order phylogeny in gamma-proteobacteria
Genome rearrangements have been studied in 30 gamma-proteobacterial complete genomes by comparing the order of a reduced set of genes on the chromosome. This set included those genes fulfilling sev...